Format

Send to:

Choose Destination

Baz2a bromodomain adjacent to zinc finger domain 2A [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104876553, updated on 27-Aug-2017

Summary

Gene symbol
Baz2a
Gene description
bromodomain adjacent to zinc finger domain 2A
See related
Ensembl:ENSFDAG00000010784
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs

Genomic context

See Baz2a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
35
Annotation release Status Assembly Chr Location
101 current DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011046155.1 (6866333..6905988)

NW_011046155.1Genomic Context describing neighboring genes Neighboring gene prostaglandin E synthase 3 Neighboring gene ATP synthase F1 subunit beta Neighboring gene uncharacterized LOC104876555 Neighboring gene RNA binding motif single stranded interacting protein 2 Neighboring gene glutaminase 2

Genomic regions, transcripts, and products

Genomic Sequence:
NW_011046155.1 Unplaced Scaffold Reference DMR_v1.0

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
bromodomain adjacent to zinc finger domain protein 2A
Names
Bromodomain adjacent to zinc finger domain protein 2A

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0

Genomic

  1. NW_011046155.1 Reference DMR_v1.0

    Range
    6866333..6905988
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010644655.2XP_010642957.1  bromodomain adjacent to zinc finger domain protein 2A isoform X2

    Conserved Domains (5) summary
    cd05503
    Location:17901886
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:841903
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:542614
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16711717
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15614
    Location:14321470
    WHIM3; WSTF, HB1, Itc1p, MBD9 motif 3
  2. XM_010644656.2XP_010642958.1  bromodomain adjacent to zinc finger domain protein 2A isoform X3

    See identical proteins and their annotated locations for XP_010642958.1

    UniProtKB/TrEMBL
    A0A091D2Y7
    Conserved Domains (5) summary
    cd05503
    Location:17881884
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:839901
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:540612
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16691715
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15614
    Location:14301468
    WHIM3; WSTF, HB1, Itc1p, MBD9 motif 3
  3. XM_010644657.2XP_010642959.1  bromodomain adjacent to zinc finger domain protein 2A isoform X3

    See identical proteins and their annotated locations for XP_010642959.1

    UniProtKB/TrEMBL
    A0A091D2Y7
    Related
    ENSFDAP00000000543.1, ENSFDAT00000014655.1
    Conserved Domains (5) summary
    cd05503
    Location:17881884
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:839901
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:540612
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16691715
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15614
    Location:14301468
    WHIM3; WSTF, HB1, Itc1p, MBD9 motif 3
  4. XM_010644658.2XP_010642960.1  bromodomain adjacent to zinc finger domain protein 2A isoform X3

    See identical proteins and their annotated locations for XP_010642960.1

    UniProtKB/TrEMBL
    A0A091D2Y7
    Conserved Domains (5) summary
    cd05503
    Location:17881884
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:839901
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:540612
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16691715
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15614
    Location:14301468
    WHIM3; WSTF, HB1, Itc1p, MBD9 motif 3
  5. XM_010644654.2XP_010642956.1  bromodomain adjacent to zinc finger domain protein 2A isoform X1

    Conserved Domains (5) summary
    cd05503
    Location:18171913
    Bromo_BAZ2A_B_like; Bromodomain, BAZ2A/BAZ2B_like subfamily. Bromo adjacent to zinc finger 2A (BAZ2A) and 2B (BAZ2B) were identified as a novel human bromodomain gene by cDNA library screening. BAZ2A is also known as Tip5 (Transcription termination factor I-interacting ...
    smart00571
    Location:868930
    DDT; domain in different transcription and chromosome remodeling factors
    cd01397
    Location:569641
    HAT_MBD; Methyl-CpG binding domains (MBD) present in putative chromatin remodelling factor such as BAZ2A; BAZ2A contains a MBD, DDT, PHD-type zinc finger and Bromo domain suggesting that BAZ2A might be associated with histone acetyltransferase (HAT) activity. The ...
    cd15629
    Location:16981744
    PHD_BAZ2A; PHD finger found in bromodomain adjacent to zinc finger domain protein 2A (BAZ2A)
    pfam15614
    Location:14591497
    WHIM3; WSTF, HB1, Itc1p, MBD9 motif 3
  6. XM_019210707.1XP_019066252.1  bromodomain adjacent to zinc finger domain protein 2A isoform X4

Support Center