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LINC01402 long intergenic non-protein coding RNA 1402 [ Homo sapiens (human) ]

Gene ID: 104797536, updated on 23-Nov-2021

Summary

Official Symbol
LINC01402provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1402provided by HGNC
Primary source
HGNC:HGNC:50685
See related
Ensembl:ENSG00000228139
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GS1-421I3.4; TCONS_00017087
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC01402 in Genome Data Viewer
Location:
Xq24
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (120117642..120119700, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (119251552..119253610, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene Rhox homeobox family member 1 pseudogene 1 Neighboring gene RHOXF1 antisense RNA 1 Neighboring gene Rhox homeobox family member 2B Neighboring gene Rhox homeobox family member 1 Neighboring gene Rhox homeobox family member 2 Neighboring gene SFR1 pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126557.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC240732
    Related
    ENST00000422226.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    120117642..120119700 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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