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mir5426 microRNA mir-5426 [ Anolis carolinensis (green anole) ]

Gene ID: 104794224, updated on 13-Feb-2024

Summary

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Gene symbol
mir5426
Gene description
microRNA mir-5426
See related
Ensembl:ENSACAG00000043620 miRBase:MI0018929
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Anolis carolinensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Iguania; Dactyloidae; Anolis
Also known as
aca-mir-5426
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

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Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current rAnoCar3.1.pri (GCF_035594765.1) 3 NC_085843.1 (19903322..19903405, complement)
102 previous assembly AnoCar2.0 (GCF_000090745.1) 3 NC_014778.1 (195203192..195203275)

Chromosome 3 - NC_085843.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 76 member B Neighboring gene centrosomal protein 57 Neighboring gene myotubularin related protein 2 Neighboring gene mastermind like transcriptional coactivator 2 Neighboring gene coiled-coil domain containing 82 Neighboring gene phosphatidylinositol-glycan biosynthesis class F protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. MicroRNAs support a turtle + lizard clade. Lyson TR, et al. Biol Lett, 2012 Feb 23. PMID 21775315, Free PMC Article
  2. miRBase: microRNA sequences, targets and gene nomenclature. Griffiths-Jones S, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381832, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • microRNA 5426

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_130026.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AAWZ02006578
    Related
    ENSACAT00000049057.1

RefSeqs of Annotated Genomes: GCF_035594765.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAnoCar3.1.pri

Genomic

  1. NC_085843.1 Reference rAnoCar3.1.pri

    Range
    19903322..19903405 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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