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AFAP1 actin filament associated protein 1 [ Corvus cornix cornix ]

Gene ID: 104690758, updated on 24-Mar-2017

Summary

Gene symbol
AFAP1
Gene description
actin filament associated protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs

Genomic context

See AFAP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current ASM73873v2 (GCF_000738735.2) Unplaced Scaffold NW_018114028.1 (29563908..29673773, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959540.1 (29563908..29629181, complement)

NW_018114028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104690756 Neighboring gene sortilin related VPS10 domain containing receptor 2 Neighboring gene actin binding LIM protein family member 2 Neighboring gene SH3 domain and tetratricopeptide repeats 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
actin filament-associated protein 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v2 Primary Assembly

Genomic

  1. NW_018114028.1 Reference ASM73873v2 Primary Assembly

    Range
    29563908..29673773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019287280.2XP_019142825.1  actin filament-associated protein 1 isoform X2

  2. XM_019287279.2XP_019142824.1  actin filament-associated protein 1 isoform X1

  3. XM_010401963.3XP_010400265.1  actin filament-associated protein 1 isoform X5

    Conserved Domains (3) summary
    cd13306
    Location:143249
    PH1_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 1
    cd13307
    Location:347447
    PH2_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 2
    pfam00169
    Location:155249
    PH; PH domain
  4. XM_010401960.3XP_010400262.1  actin filament-associated protein 1 isoform X3

    Conserved Domains (3) summary
    cd13306
    Location:143249
    PH1_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 1
    cd13307
    Location:347447
    PH2_AFAP; Actin filament associated protein family Pleckstrin homology (PH) domain, repeat 2
    pfam00169
    Location:155249
    PH; PH domain
  5. XM_019287281.2XP_019142826.1  actin filament-associated protein 1 isoform X4

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