Format

Send to:

Choose Destination

CYLD CYLD lysine 63 deubiquitinase [ Corvus cornix cornix ]

Gene ID: 104687458, updated on 8-Sep-2017

Summary

Gene symbol
CYLD
Gene description
CYLD lysine 63 deubiquitinase
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus cornix cornix (sub-species: cornix)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs

Genomic context

See CYLD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
102 current ASM73873v2 (GCF_000738735.2) Unplaced Scaffold NW_018114017.1 (4751026..4778162, complement)
101 previous assembly Hooded_Crow_genome (GCF_000738735.1) Unplaced Scaffold NW_010959375.1 (8733610..8760749)

NW_018114017.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104687459 Neighboring gene spalt like transcription factor 1 Neighboring gene uncharacterized LOC109144234 Neighboring gene sorting nexin 20 Neighboring gene naked cuticle homolog 1

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • RIG-I-like receptor signaling pathway, organism-specific biosystem (from KEGG)
    RIG-I-like receptor signaling pathway, organism-specific biosystemSpecific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular ...
  • RIG-I-like receptor signaling pathway, conserved biosystem (from KEGG)
    RIG-I-like receptor signaling pathway, conserved biosystemSpecific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular ...

General protein information

Preferred Names
ubiquitin carboxyl-terminal hydrolase CYLD

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Corvus cornix cornix Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM73873v2 Primary Assembly

Genomic

  1. NW_018114017.1 Reference ASM73873v2 Primary Assembly

    Range
    4751026..4778162 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010396575.3XP_010394877.2  ubiquitin carboxyl-terminal hydrolase CYLD isoform X1

    Conserved Domains (3) summary
    smart01052
    Location:470537
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:590945
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:305468
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
  2. XM_010396576.3XP_010394878.2  ubiquitin carboxyl-terminal hydrolase CYLD isoform X2

    Conserved Domains (3) summary
    smart01052
    Location:425492
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:545900
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:260423
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
Support Center