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SPECC1 sperm antigen with calponin homology and coiled-coil domains 1 [ Colius striatus (speckled mousebird) ]

Gene ID: 104562364, updated on 12-Mar-2017

Summary

Gene symbol
SPECC1
Gene description
sperm antigen with calponin homology and coiled-coil domains 1
Locus tag
N325_10564
Gene type
protein coding
RefSeq status
MODEL
Organism
Colius striatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Coliiformes; Coliidae; Colius
Also known as
Cytospin-B
Orthologs

Genomic context

See SPECC1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current ASM69071v1 (GCF_000690715.1) Unplaced Scaffold NW_010712787.1 (9162..64783)

NW_010712787.1Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Genomic Sequence:
NW_010712787.1 Unplaced Scaffold Reference ASM69071v1

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Colius striatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69071v1

Genomic

  1. NW_010712787.1 Reference ASM69071v1

    Range
    9162..64783
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010208435.1XP_010206737.1  cytospin-B

    Conserved Domains (3) summary
    cd00014
    Location:881981
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    pfam05010
    Location:354569
    TACC; Transforming acidic coiled-coil-containing protein (TACC)
    cl02488
    Location:284442
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
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