U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC01033 long intergenic non-protein coding RNA 1033 [ Homo sapiens (human) ]

Gene ID: 104355136, updated on 13-May-2022

Summary

Official Symbol
LINC01033provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1033provided by HGNC
Primary source
HGNC:HGNC:49019
See related
Ensembl:ENSG00000249069 AllianceGenome:HGNC:49019
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC01033 in Genome Data Viewer
Location:
5q11.2
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (54320944..54415125)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (55148506..55242740)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (53616774..53710955)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene ADP ribosylation factor like GTPase 15 Neighboring gene RNA, 7SL, cytoplasmic 801, pseudogene Neighboring gene CRISPRi-validated cis-regulatory element chr5.1314 Neighboring gene GATA motif-containing MPRA enhancer 36 Neighboring gene ribosomal protein L37 pseudogene 25 Neighboring gene heat shock protein family B (small) member 3 Neighboring gene sorting nexin 18

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126379.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC092366
    Related
    ENST00000523194.7

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

    Range
    54320944..54415125
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060929.1 Alternate T2T-CHM13v2.0

    Range
    55148506..55242740
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)