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SMAD1-AS1 SMAD1 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 104326058, updated on 23-Nov-2021

Summary

Official Symbol
SMAD1-AS1provided by HGNC
Official Full Name
SMAD1 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:49379
See related
Ensembl:ENSG00000250902
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Ubiquitous expression in endometrium (RPKM 12.7), fat (RPKM 9.3) and 25 other tissues See more
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Genomic context

See SMAD1-AS1 in Genome Data Viewer
Location:
4q31.21
Exon count:
2
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (145514578..145517194, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (146435730..146438346, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene NMNAT1 pseudogene 4 Neighboring gene SMAD family member 1 Neighboring gene SMAD1 antisense RNA 2 Neighboring gene uncharacterized LOC285422 Neighboring gene long intergenic non-protein coding RNA 2491

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126371.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC093796, HY008085
    Related
    ENST00000513542.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    145514578..145517194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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