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ZNF511-PRAP1 ZNF511-PRAP1 readthrough [ Homo sapiens (human) ]

Gene ID: 104326056, updated on 13-May-2022

Summary

Official Symbol
ZNF511-PRAP1provided by HGNC
Official Full Name
ZNF511-PRAP1 readthroughprovided by HGNC
Primary source
HGNC:HGNC:38088
See related
Ensembl:ENSG00000283496 AllianceGenome:HGNC:38088
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
This locus represents naturally occurring readthrough transcription between the neighboring ZNF511 (zinc finger protein 511) and PRAP1 (proline-rich acidic protein 1) genes on chromosome 10. The putative readthrough transcript may encode a fusion protein that shares sequence identity with each individual gene product and may be involved in the regulation of gene promoters, particularly those found on transfected plasmids. [provided by RefSeq, Apr 2017]
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Genomic context

See ZNF511-PRAP1 in Genome Data Viewer
Location:
10q26.3
Exon count:
9
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (133308914..133352683)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (134263351..134307799)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (135122418..135166187)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 8 Neighboring gene tubulin gamma complex associated protein 2 Neighboring gene uncharacterized LOC124902562 Neighboring gene Sharpr-MPRA regulatory region 2011 Neighboring gene zinc finger protein 511 Neighboring gene calcyon neuron specific vesicular protein Neighboring gene BANF1 pseudogene 2 Neighboring gene proline rich acidic protein 1 Neighboring gene fucose mutarotase Neighboring gene enoyl-CoA hydratase, short chain 1 Neighboring gene microRNA 3944

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001396060.1NP_001382989.1  ZNF511-PRAP1 readthrough

    Status: VALIDATED

    Source sequence(s)
    AL360181
    Related
    ENSP00000357542.5, ENST00000368554.8
    Conserved Domains (1) summary
    sd00020
    Location:109130
    ZF_C2H2; C2H2 Zn finger [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    133308914..133352683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    134263351..134307799
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)