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NRIR negative regulator of interferon response [ Homo sapiens (human) ]

Gene ID: 104326052, updated on 25-Jan-2022

Summary

Official Symbol
NRIRprovided by HGNC
Official Full Name
negative regulator of interferon responseprovided by HGNC
Primary source
HGNC:HGNC:51269
See related
AllianceGenome:HGNC:51269
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
lncCMPK2; lncRNA-CMPK2
Summary
This gene is thought to produce a functional long non-coding RNA. This transcript may be a negative regulator of interferon response. [provided by RefSeq, Feb 2015]
Expression
Broad expression in bone marrow (RPKM 2.1), spleen (RPKM 1.3) and 15 other tissues See more
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Genomic context

See NRIR in Genome Data Viewer
Location:
2p25.2
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 2 NC_000002.12 (6828554..6840464, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (6968685..6980595, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373404 Neighboring gene Sharpr-MPRA regulatory region 11536 Neighboring gene cytidine/uridine monophosphate kinase 2 Neighboring gene radical S-adenosyl methionine domain containing 2 Neighboring gene glycosaminoglycan regulatory associated long non-coding RNA Neighboring gene ring finger protein 144A

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • negative regulator of interferon response (non-protein coding)

Clone Names

  • AC017076.5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126359.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AW075990, BP421873, BQ437827

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p13 Primary Assembly

    Range
    6828554..6840464 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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