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ARHGAP42 Rho GTPase activating protein 42 [ Picoides pubescens (Downy woodpecker) ]

Gene ID: 104298367, updated on 23-Sep-2017

Summary

Gene symbol
ARHGAP42
Gene description
Rho GTPase activating protein 42
Locus tag
N307_13197
Gene type
protein coding
RefSeq status
MODEL
Organism
Picoides pubescens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Piciformes; Picidae; Picoides
Annotation information
Annotation category: partial on reference assembly
Orthologs

Genomic context

See ARHGAP42 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current ASM69900v1 (GCF_000699005.1) Unplaced Scaffold NW_009663120.1 (559040..665434, complement)

NW_009663120.1Genomic Context describing neighboring genes Neighboring gene transient receptor potential cation channel subfamily C member 6 Neighboring gene progesterone receptor

Genomic regions, transcripts, and products

Genomic Sequence:
NW_009663120.1 Unplaced Scaffold Reference ASM69900v1

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
rho GTPase-activating protein 42

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Picoides pubescens Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69900v1

Genomic

  1. NW_009663120.1 Reference ASM69900v1

    Range
    559040..665434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009898425.1XP_009896727.1  rho GTPase-activating protein 42

    Conserved Domains (5) summary
    cd12066
    Location:736790
    SH3_GRAF3; Src Homology 3 domain of GTPase Regulator Associated with Focal adhesion kinase 3
    cd04374
    Location:285483
    RhoGAP_Graf; RhoGAP_Graf: GTPase-activator protein (GAP) domain for Rho-like GTPases found in GRAF (GTPase regulator associated with focal adhesion kinase); Graf is a multi-domain protein, containing SH3 and PH domains, that binds focal adhesion kinase and influences ...
    cd01249
    Location:183292
    BAR-PH_GRAF_family; GTPase Regulator Associated with Focal adhesion and related proteins Pleckstrin homology (PH) domain
    pfam00169
    Location:183285
    PH; PH domain
    cl12013
    Location:1141
    BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
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