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LINC01221 long intergenic non-protein coding RNA 1221 [ Homo sapiens (human) ]

Gene ID: 104266961, updated on 23-Nov-2021

Summary

Official Symbol
LINC01221provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1221provided by HGNC
Primary source
HGNC:HGNC:49671
See related
Ensembl:ENSG00000235492
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
TCONS_00000366
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC01221 in Genome Data Viewer
Location:
1q32.1
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (199016133..199076735)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (198985262..199045864)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371679 Neighboring gene ribosomal protein S2 pseudogene 9 Neighboring gene long intergenic non-protein coding RNA 1222 Neighboring gene uncharacterized LOC107985243 Neighboring gene long intergenic non-protein coding RNA 2789 Neighboring gene ribosomal protein L23a pseudogene 16

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126351.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC096631, AC105941
    Related
    ENST00000432488.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    199016133..199076735
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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