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mutM formamidopyrimidine-DNA glycosylase [ Pseudomonas putida KT2440 ]

Gene ID: 1042634, updated on 6-Sep-2017

Summary

Gene symbol
mutM
Gene description
formamidopyrimidine-DNA glycosylase
Locus tag
PP_5125
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas putida KT2440 (strain: KT2440)
Lineage
Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas

Genomic context

Sequence:
NC_002947.4 (5846019..5846831, complement)

NC_002947.4Genomic Context describing neighboring genes Neighboring gene phosphopantetheine adenylyltransferase Neighboring gene 4Fe-4S cluster-containing protein Neighboring gene HDOD domain-containing protein Neighboring gene ribosomal RNA large subunit methyltransferase I

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Base excision repair, organism-specific biosystem (from KEGG)
    Base excision repair, organism-specific biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...
  • Base excision repair, conserved biosystem (from KEGG)
    Base excision repair, conserved biosystemBase excision repair (BER) is the predominant DNA damage repair pathway for the processing of small base lesions, derived from oxidation and alkylation damages. BER is normally defined as DNA repair ...

General protein information

Names
formamidopyrimidine-DNA glycosylase
NP_747226.1

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002947.4 Reference assembly

    Range
    5846019..5846831 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_747226.1 formamidopyrimidine-DNA glycosylase [Pseudomonas putida KT2440]

    See identical proteins and their annotated locations for NP_747226.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q88CQ5
    Conserved Domains (1) summary
    PRK01103
    Location:1270
    PRK01103; formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase; Validated
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