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LOC104218671 nuclear transcription factor Y subunit A-1-like [ Nicotiana sylvestris (wood tobacco) ]

Gene ID: 104218671, updated on 22-Oct-2023

Summary

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Gene symbol
LOC104218671
Gene description
nuclear transcription factor Y subunit A-1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Nicotiana sylvestris
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Nsyl (GCF_000393655.1) Unplaced Scaffold NW_009544930.1 (38386..47862)

NW_009544930.1Genomic Context describing neighboring genes Neighboring gene translocation protein sec62-like Neighboring gene uncharacterized LOC104218673

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_009544930.1 Unplaced Scaffold Reference Nsyl Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear transcription factor Y subunit A-1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nicotiana sylvestris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Nsyl Primary Assembly

Genomic

  1. NW_009544930.1 Reference Nsyl Primary Assembly

    Range
    38386..47862
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009769211.1 → XP_009767513.1  nuclear transcription factor Y subunit A-1-like

    See identical proteins and their annotated locations for XP_009767513.1

    UniProtKB/TrEMBL
    A0A1U7VMC5
    Conserved Domains (1) summary
    smart00521
    Location:166 → 227
    CBF; CCAAT-Binding transcription Factor

  2. XM_009769212.1 → XP_009767514.1  nuclear transcription factor Y subunit A-1-like

    See identical proteins and their annotated locations for XP_009767514.1

    UniProtKB/TrEMBL
    A0A1U7VMC5
    Conserved Domains (1) summary
    smart00521
    Location:166 → 227
    CBF; CCAAT-Binding transcription Factor
Nucleotide Protein
Heading Accession and Version

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