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THUMPD2 THUMP domain containing 2 [ Nipponia nippon (crested ibis) ]

Gene ID: 104014933, updated on 8-Apr-2017

Summary

Gene symbol
THUMPD2
Gene description
THUMP domain containing 2
Locus tag
Y956_07311
Gene type
protein coding
RefSeq status
MODEL
Organism
Nipponia nippon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Pelecaniformes; Threskiornithidae; Nipponia
Orthologs

Genomic context

See THUMPD2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current ASM70822v1 (GCF_000708225.1) Unplaced Scaffold NW_009001173.1 (1161610..1172104)

NW_009001173.1Genomic Context describing neighboring genes Neighboring gene chromogranin B Neighboring gene glycerophosphocholine phosphodiesterase 1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_009001173.1 Unplaced Scaffold Reference ASM70822v1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
THUMP domain-containing protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Nipponia nippon Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM70822v1 Primary Assembly

Genomic

  1. NW_009001173.1 Reference ASM70822v1 Primary Assembly

    Range
    1161610..1172104
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009467616.1XP_009465891.1  THUMP domain-containing protein 2

    Conserved Domains (3) summary
    cd11715
    Location:866
    THUMP_AdoMetMT; THUMP domain associated with S-adenosylmethionine-dependent methyltransferases
    smart00981
    Location:196254
    THUMP; The THUMP domain is named after after thiouridine synthases, methylases and PSUSs
    cl17173
    Location:264402
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
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