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LOC103990978 succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial [ Musa acuminata (dwarf banana) ]

Gene ID: 103990978, updated on 25-Jan-2024

Summary

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Gene symbol
LOC103990978
Gene description
succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial
Gene type
protein coding
RefSeq status
MODEL
Organism
Musa acuminata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Zingiberales; Musaceae; Musa
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Genomic context

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Location:
chromosome: 7
Exon count:
16
Annotation release Status Assembly Chr Location
101 current ASM31385v2 (GCF_000313855.2) 7 NC_025208.1 (657494..666092, complement)

Chromosome 7 - NC_025208.1Genomic Context describing neighboring genes Neighboring gene transcription factor bHLH18 Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene U1 small nuclear ribonucleoprotein 70 kDa-like Neighboring gene proline-rich receptor-like protein kinase PERK4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_025208.1 Chromosome 7 Reference ASM31385v2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome profiling of resistant and susceptible Cavendish banana roots following inoculation with Fusarium oxysporum f. sp. cubense tropical race 4. Li CY, et al. BMC Genomics, 2012 Aug 5. PMID 22863187, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables electron transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables succinate dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial electron transport, succinate to ubiquinone IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Musa acuminata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM31385v2

Genomic

  1. NC_025208.1 Reference ASM31385v2

    Range
    657494..666092 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009410303.2 → XP_009408578.1  succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

    UniProtKB/TrEMBL
    A0A804JQR2, A0A8D7ARE1
    Conserved Domains (3) summary
    PLN00128
    Location:1 → 636
    PLN00128; Succinate dehydrogenase [ubiquinone] flavoprotein subunit
    pfam02910
    Location:505 → 636
    Succ_DH_flav_C; Fumarate reductase flavoprotein C-term
    cl21454
    Location:75 → 463
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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