U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC103867994 acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum [ Brassica rapa (field mustard) ]

Gene ID: 103867994, updated on 7-Apr-2025
Gene symbol
LOC103867994
Gene description
acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica rapa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
Try the new Gene page
Try the new Transcripts and proteins table
See LOC103867994 in Genome Data Viewer
Location:
chromosome: A5
Exon count:
8
Annotation release Status Assembly Chr Location
103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A05 NC_024799.2 (8104182..8108955)
101 previous assembly Brapa_1.0 (GCF_000309985.1) A5 NC_024799.1 (7672652..7677443)

Chromosome A05 - NC_024799.2Genomic Context describing neighboring genes Neighboring gene protein trichome birefringence-like 45 Neighboring gene protein PSY3 Neighboring gene uncharacterized LOC117134039 Neighboring gene uncharacterized LOC103868246

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum
Names
omega-3 fatty acid desaturase, endoplasmic reticulum

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Brap_v3.01 Primary Assembly

Genomic

  1. NC_024799.2 Reference CAAS_Brap_v3.01 Primary Assembly

    Range
    8104182..8108955
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_033291710.1 → XP_033147601.1  acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum isoform X2

    UniProtKB/TrEMBL
    M4E1W7
    Conserved Domains (1) summary
    PLN02498
    Location:6 → 349
    PLN02498; omega-3 fatty acid desaturase

  2. XM_009146092.3 → XP_009144340.1  acyl-lipid omega-3 desaturase (cytochrome b5), endoplasmic reticulum isoform X1

    See identical proteins and their annotated locations for XP_009144340.1

    UniProtKB/TrEMBL
    A0A3P5ZEU3, M4DPA7, M4E1W7
    Conserved Domains (1) summary
    PLN02498
    Location:6 → 379
    PLN02498; omega-3 fatty acid desaturase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases