U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC103859746 alcohol dehydrogenase-like 5 [ Brassica rapa (field mustard) ]

Gene ID: 103859746, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
LOC103859746
Gene description
alcohol dehydrogenase-like 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Brassica rapa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: A1
Exon count:
9
Annotation release Status Assembly Chr Location
103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A01 NC_024795.2 (6669016..6683081, complement)
101 previous assembly Brapa_1.0 (GCF_000309985.1) A1 NC_024795.1 (6489671..6500657, complement)

Chromosome A01 - NC_024795.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117133453 Neighboring gene probable pectate lyase 16 Neighboring gene putative defensin-like protein 234 Neighboring gene calcium permeable stress-gated cation channel 1 Neighboring gene replication protein A 70 kDa DNA-binding subunit A

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-(hydroxymethyl)glutathione dehydrogenase (NAD(P)+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables alcohol dehydrogenase (NAD+) activity, zinc-dependent IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in formaldehyde catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alcohol dehydrogenase-like 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CAAS_Brap_v3.01 Primary Assembly

Genomic

  1. NC_024795.2 Reference CAAS_Brap_v3.01 Primary Assembly

    Range
    6669016..6683081 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009137328.3 → XP_009135576.1  alcohol dehydrogenase-like 5

    UniProtKB/TrEMBL
    A0A3P5ZF14
    Conserved Domains (2) summary
    PLN02740
    Location:8 → 384
    PLN02740; Alcohol dehydrogenase-like
    cl16912
    Location:15 → 385
    MDR; Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases