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RALGPS1 Ral GEF with PH domain and SH3 binding motif 1 [ Serinus canaria (common canary) ]

Gene ID: 103818910, updated on 8-Apr-2017

Summary

Gene symbol
RALGPS1
Gene description
Ral GEF with PH domain and SH3 binding motif 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Serinus canaria
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Passeroidea; Fringillidae; Carduelinae; Serinus
Orthologs

Genomic context

See RALGPS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
25
Annotation release Status Assembly Chr Location
101 current SCA1 (GCF_000534875.1) Unplaced Scaffold NW_007931144.1 (66165..144415, complement)

NW_007931144.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108962496 Neighboring gene uncharacterized LOC103819095 Neighboring gene F-box and WD repeat domain containing 2 Neighboring gene angiopoietin like 2 Neighboring gene zinc finger and BTB domain containing 34 Neighboring gene LIM homeobox transcription factor 1 beta

Genomic regions, transcripts, and products

Genomic Sequence:
NW_007931144.1 Unplaced Scaffold Reference SCA1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
ras-specific guanine nucleotide-releasing factor RalGPS1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Serinus canaria Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SCA1 Primary Assembly

Genomic

  1. NW_007931144.1 Reference SCA1 Primary Assembly

    Range
    66165..144415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018917532.1XP_018773077.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X2

  2. XM_018917533.1XP_018773078.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X3

  3. XM_018917531.1XP_018773076.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

  4. XM_018917526.1XP_018773071.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

  5. XM_018917529.1XP_018773074.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

  6. XM_009093310.2XP_009091558.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

    Conserved Domains (3) summary
    smart00147
    Location:46290
    RasGEF; Guanine nucleotide exchange factor for Ras-like small GTPases
    cd13310
    Location:459574
    PH_RalGPS1_2; Ral GEF with PH domain and SH3 binding motif 1 and 2 Pleckstrin homology (PH) domain
    pfam00169
    Location:458569
    PH; PH domain
  7. XM_018917530.1XP_018773075.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

  8. XM_018917527.1XP_018773072.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

  9. XM_018917528.1XP_018773073.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X1

  10. XM_018917534.1XP_018773079.1  ras-specific guanine nucleotide-releasing factor RalGPS1 isoform X4

RNA

  1. XR_001991127.1 RNA Sequence

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