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Zbtb16 zinc finger and BTB domain containing 16 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103733862, updated on 28-Aug-2017

Summary

Gene symbol
Zbtb16
Gene description
zinc finger and BTB domain containing 16
See related
Ensembl:ENSNGAG00000016604
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs

Genomic context

See Zbtb16 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008337842.1 (17298..210467, complement)

NW_008337842.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108490845 Neighboring gene 5-hydroxytryptamine receptor 3A Neighboring gene 5-hydroxytryptamine receptor 3B

Genomic regions, transcripts, and products

Genomic Sequence:
NW_008337842.1 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Pathways from BioSystems

General protein information

Preferred Names
zinc finger and BTB domain-containing protein 16

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008337842.1 Reference S.galili_v1.0 Primary Assembly

    Range
    17298..210467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008832739.2XP_008830961.1  zinc finger and BTB domain-containing protein 16

    See identical proteins and their annotated locations for XP_008830961.1

    Related
    ENSNGAP00000015623.1, ENSNGAT00000021230.1
    Conserved Domains (6) summary
    smart00225
    Location:35106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:448622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:518540
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25106
    BTB; BTB/POZ domain
    pfam13465
    Location:561584
    zf-H2C2_2; Zinc-finger double domain
  2. XM_008832738.2XP_008830960.1  zinc finger and BTB domain-containing protein 16

    See identical proteins and their annotated locations for XP_008830960.1

    Conserved Domains (6) summary
    smart00225
    Location:35106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:448622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:518540
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25106
    BTB; BTB/POZ domain
    pfam13465
    Location:561584
    zf-H2C2_2; Zinc-finger double domain
  3. XM_008832736.2XP_008830958.1  zinc finger and BTB domain-containing protein 16

    See identical proteins and their annotated locations for XP_008830958.1

    Conserved Domains (6) summary
    smart00225
    Location:35106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:448622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:518540
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25106
    BTB; BTB/POZ domain
    pfam13465
    Location:561584
    zf-H2C2_2; Zinc-finger double domain
  4. XM_008832737.2XP_008830959.1  zinc finger and BTB domain-containing protein 16

    See identical proteins and their annotated locations for XP_008830959.1

    Conserved Domains (6) summary
    smart00225
    Location:35106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:448622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:518540
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25106
    BTB; BTB/POZ domain
    pfam13465
    Location:561584
    zf-H2C2_2; Zinc-finger double domain
  5. XM_017798068.1XP_017653557.1  zinc finger and BTB domain-containing protein 16

    Conserved Domains (6) summary
    smart00225
    Location:35106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:448622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:518540
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25106
    BTB; BTB/POZ domain
    pfam13465
    Location:561584
    zf-H2C2_2; Zinc-finger double domain
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