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LOC103693040 prostate and testis expressed protein 2-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 103693040, updated on 29-Feb-2024

Summary

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Symbol
LOC103693040provided by RGD
Full Name
prostate and testis expressed protein 2-likeprovided by RGD
Primary source
RGD:9140326
See related
Ensembl:ENSRNOG00000030188 AllianceGenome:RGD:9140326
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Restricted expression toward (RPKM 5.5) See more
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Genomic context

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Location:
8q21
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 8 NC_086026.1 (42490681..42491770, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 8 NC_051343.1 (34233003..34234092, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 8 NC_005107.4 (37125153..37126812, complement)

Chromosome 8 - NC_086026.1Genomic Context describing neighboring genes Neighboring gene prostate and testis expressed 5 Neighboring gene prostate and testis expressed protein F Neighboring gene prostate and testis expressed 14 Neighboring gene prostate and testis expressed 14, pseudogene 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
prostate and testis expressed protein 13-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086026.1 Reference GRCr8

    Range
    42490681..42491770 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039082863.1 → XP_038938791.1  prostate and testis expressed protein 13-like isoform X2

  2. XM_008766075.2 → XP_008764297.1  prostate and testis expressed protein 13-like isoform X1

    See identical proteins and their annotated locations for XP_008764297.1

    UniProtKB/TrEMBL
    D3ZMV3
    Related
    ENSRNOP00000039556.2, ENSRNOT00000040783.2
Nucleotide Protein Strain
Heading Accession and Version

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