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CYLD CYLD lysine 63 deubiquitinase [ Ursus maritimus (polar bear) ]

Gene ID: 103673798, updated on 8-Apr-2017

Summary

Gene symbol
CYLD
Gene description
CYLD lysine 63 deubiquitinase
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs

Genomic context

See CYLD in Genome Data Viewer
Location:
chromosome: Un
Exon count:
17
Annotation release Status Assembly Chr Location
100 current UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907206.1 (10565592..10628462, complement)

NW_007907206.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C14orf119 homolog Neighboring gene spalt like transcription factor 1 Neighboring gene nucleotide binding oligomerization domain containing 2 Neighboring gene sorting nexin 20

Genomic regions, transcripts, and products

Genomic Sequence:
NW_007907206 unplaced scaffold reference UrsMar_1.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

  • Osteoclast differentiation, organism-specific biosystem (from KEGG)
    Osteoclast differentiation, organism-specific biosystemThe osteoclasts, multinucleared cells originating from the hematopoietic monocyte-macrophage lineage, are responsible for bone resorption. Osteoclastogenesis is mainly regulated by signaling pathways...
  • Osteoclast differentiation, conserved biosystem (from KEGG)
    Osteoclast differentiation, conserved biosystemThe osteoclasts, multinucleared cells originating from the hematopoietic monocyte-macrophage lineage, are responsible for bone resorption. Osteoclastogenesis is mainly regulated by signaling pathways...
  • RIG-I-like receptor signaling pathway, organism-specific biosystem (from KEGG)
    RIG-I-like receptor signaling pathway, organism-specific biosystemSpecific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular ...
  • RIG-I-like receptor signaling pathway, conserved biosystem (from KEGG)
    RIG-I-like receptor signaling pathway, conserved biosystemSpecific families of pattern recognition receptors are responsible for detecting viral pathogens and generating innate immune responses. Non-self RNA appearing in a cell as a result of intracellular ...

General protein information

Preferred Names
LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase CYLD

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UrsMar_1.0 Primary Assembly

Genomic

  1. NW_007907206.1 Reference UrsMar_1.0 Primary Assembly

    Range
    10565592..10628462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008702635.1XP_008700857.1  LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase CYLD

    Conserved Domains (3) summary
    smart01052
    Location:461529
    CAP_GLY; Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network
    cd02670
    Location:582937
    Peptidase_C19N; A subfamily of Peptidase C19. Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyze bonds involving the carboxyl ...
    pfam16607
    Location:296460
    CYLD_phos_site; Phosphorylation region of CYLD, unstructured
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