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LOC103634861 tryptophan aminotransferase-related protein 2 [ Zea mays ]

Gene ID: 103634861, updated on 13-May-2025
Gene symbol
LOC103634861
Gene description
tryptophan aminotransferase-related protein 2
Locus tag
ZEAMMB73_Zm00001d008700
See related
EnsemblRapid:Zm00001eb336530
Gene type
protein coding
RefSeq status
MODEL
Organism
Zea mays
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
Also known as
vt2; GRMZM2G127308
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See LOC103634861 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2025_02 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 8 NC_050103.1 (17391160..17395386, complement)

Chromosome 8 - NC_050103.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103634859 Neighboring gene trimethyltridecatetraene synthase-like Neighboring gene nuclear pore complex protein NUP96 Neighboring gene 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic-like Neighboring gene E3 ubiquitin protein ligase RIE1-like

Genomic Sequence:
NC_050103.1 Chromosome 8 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbon-sulfur lyase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
tryptophan aminotransferase-related protein 2
Names
L-tryptophan--pyruvate aminotransferase 1
tryptophan aminotransferase
vanishing tassel2

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RefSeqs of Annotated Genomes: GCF_902167145.1-RS_2025_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

Genomic

  1. NC_050103.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Range
    17391160..17395386 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008657447.4 → XP_008655669.1  tryptophan aminotransferase-related protein 2

    See identical proteins and their annotated locations for XP_008655669.1

    UniProtKB/TrEMBL
    A0A804QLV2, F2FB37
    Related
    Zm00001eb336530_P001, Zm00001eb336530_T001
    Conserved Domains (1) summary
    cl18945
    Location:171 → 529
    AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
Nucleotide Protein
Heading Accession and Version

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