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LOC103481241 carnitine O-palmitoyltransferase 1, liver isoform-like [ Poecilia reticulata (guppy) ]

Gene ID: 103481241, updated on 9-Nov-2023

Summary

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Gene symbol
LOC103481241
Gene description
carnitine O-palmitoyltransferase 1, liver isoform-like
See related
Ensembl:ENSPREG00000021942
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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Location:
chromosome: LG19
Exon count:
20
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG19 NC_024349.1 (5265265..5286267, complement)

Linkage Group LG19 - NC_024349.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal assembly factor 3 Neighboring gene troponin T1, slow skeletal type Neighboring gene BR serine/threonine kinase 1a Neighboring gene uncharacterized LOC103481245 Neighboring gene uncharacterized LOC103481244

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024349.1 Chromosome LG19 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carnitine O-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carnitine O-palmitoyltransferase 1, liver isoform-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024349.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    5265265..5286267 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008436599.2 → XP_008434821.1  carnitine O-palmitoyltransferase 1, liver isoform-like isoform X2

    UniProtKB/TrEMBL
    A0A3P9QEB0
    Related
    ENSPREP00000032394.1, ENSPRET00000032762.1
    Conserved Domains (2) summary
    pfam00755
    Location:170 → 758
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 46
    CPT_N; Carnitine O-palmitoyltransferase N-terminus

  2. XM_017301702.1 → XP_017157191.1  carnitine O-palmitoyltransferase 1, liver isoform-like isoform X1

    UniProtKB/TrEMBL
    A0A3P9QE15, A0A3P9QEB0
    Related
    ENSPREP00000032406.1, ENSPRET00000032774.1
    Conserved Domains (2) summary
    pfam00755
    Location:170 → 759
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 46
    CPT_N; Carnitine O-palmitoyltransferase N-terminus

  3. XM_008436598.2 → XP_008434820.1  carnitine O-palmitoyltransferase 1, liver isoform-like isoform X1

    UniProtKB/TrEMBL
    A0A3P9QE15, A0A3P9QEB0
    Conserved Domains (2) summary
    pfam00755
    Location:170 → 759
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
    pfam16484
    Location:1 → 46
    CPT_N; Carnitine O-palmitoyltransferase N-terminus
Nucleotide Protein
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