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rbm45 RNA binding motif protein 45 [ Poecilia reticulata (guppy) ]

Gene ID: 103476586, updated on 14-Oct-2018

Summary

Gene symbol
rbm45
Gene description
RNA binding motif protein 45
See related
Ensembl:ENSPREG00000004579
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs

Genomic context

See rbm45 in Genome Data Viewer
Location:
chromosome: LG15
Exon count:
10
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG15 NC_024345.1 (6126911..6138815)

Linkage Group LG15 - NC_024345.1Genomic Context describing neighboring genes Neighboring gene gap junction alpha-5 protein-like Neighboring gene cytochrome c Neighboring gene zinc finger CCCH-type containing 15 Neighboring gene zinc finger protein 804A Neighboring gene uncharacterized LOC103476584

Genomic regions, transcripts, and products

Genomic Sequence:
NC_024345.1 Chromosome LG15 Reference Guppy_female_1.0+MT Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024345.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    6126911..6138815
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008429057.2XP_008427279.1  RNA-binding protein 45 isoform X2

    Conserved Domains (5) summary
    COG0724
    Location:4270
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12366
    Location:1696
    RRM1_RBM45; RNA recognition motif 1 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12367
    Location:112185
    RRM2_RBM45; RNA recognition motif 2 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12368
    Location:235304
    RRM3_RBM45; RNA recognition motif 3 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12369
    Location:374441
    RRM4_RBM45; RNA recognition motif 4 in RNA-binding protein 45 (RBM45) and similar proteins
  2. XM_008429055.2XP_008427277.1  RNA-binding protein 45 isoform X1

    See identical proteins and their annotated locations for XP_008427277.1

    Conserved Domains (5) summary
    COG0724
    Location:4276
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12366
    Location:1696
    RRM1_RBM45; RNA recognition motif 1 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12367
    Location:112185
    RRM2_RBM45; RNA recognition motif 2 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12368
    Location:235308
    RRM3_RBM45; RNA recognition motif 3 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12369
    Location:378445
    RRM4_RBM45; RNA recognition motif 4 in RNA-binding protein 45 (RBM45) and similar proteins
  3. XM_008429056.2XP_008427278.1  RNA-binding protein 45 isoform X1

    See identical proteins and their annotated locations for XP_008427278.1

    Related
    ENSPREP00000006642.1, ENSPRET00000006729.1
    Conserved Domains (5) summary
    COG0724
    Location:4276
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    cd12366
    Location:1696
    RRM1_RBM45; RNA recognition motif 1 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12367
    Location:112185
    RRM2_RBM45; RNA recognition motif 2 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12368
    Location:235308
    RRM3_RBM45; RNA recognition motif 3 in RNA-binding protein 45 (RBM45) and similar proteins
    cd12369
    Location:378445
    RRM4_RBM45; RNA recognition motif 4 in RNA-binding protein 45 (RBM45) and similar proteins
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