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zbtb16 zinc finger and BTB domain containing 16 [ Poecilia reticulata (guppy) ]

Gene ID: 103476321, updated on 14-Oct-2018

Summary

Gene symbol
zbtb16
Gene description
zinc finger and BTB domain containing 16
See related
Ensembl:ENSPREG00000015369
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs

Genomic context

See zbtb16 in Genome Data Viewer
Location:
chromosome: LG14
Exon count:
9
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG14 NC_024344.1 (24924002..25107225, complement)

Linkage Group LG14 - NC_024344.1Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine receptor 3B Neighboring gene 5-hydroxytryptamine receptor 3A Neighboring gene uncharacterized LOC103476320 Neighboring gene neural cell adhesion molecule 1-like Neighboring gene uncharacterized LOC103476326

Genomic regions, transcripts, and products

Genomic Sequence:
NC_024344.1 Chromosome LG14 Reference Guppy_female_1.0+MT Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
zinc finger and BTB domain-containing protein 16

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024344.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    24924002..25107225 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017308633.1XP_017164122.1  zinc finger and BTB domain-containing protein 16

    Conserved Domains (6) summary
    smart00225
    Location:35106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:438613
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:539559
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:508530
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25106
    BTB; BTB/POZ domain
    pfam13465
    Location:552575
    zf-H2C2_2; Zinc-finger double domain
  2. XM_008428573.2XP_008426795.1  zinc finger and BTB domain-containing protein 16

    See identical proteins and their annotated locations for XP_008426795.1

    Conserved Domains (6) summary
    smart00225
    Location:35106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:438613
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:539559
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:508530
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25106
    BTB; BTB/POZ domain
    pfam13465
    Location:552575
    zf-H2C2_2; Zinc-finger double domain
  3. XM_008428574.2XP_008426796.1  zinc finger and BTB domain-containing protein 16

    See identical proteins and their annotated locations for XP_008426796.1

    Related
    ENSPREP00000022769.1, ENSPRET00000023006.1
    Conserved Domains (6) summary
    smart00225
    Location:35106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:438613
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:539559
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:508530
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25106
    BTB; BTB/POZ domain
    pfam13465
    Location:552575
    zf-H2C2_2; Zinc-finger double domain
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