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cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 [ Poecilia reticulata (guppy) ]

Gene ID: 103465999, updated on 14-Oct-2018

Summary

Gene symbol
cacna2d1
Gene description
calcium voltage-gated channel auxiliary subunit alpha2delta 1
See related
Ensembl:ENSPREG00000014119
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs

Genomic context

See cacna2d1 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
43
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG6 NC_024336.1 (13045404..13115866)

Linkage Group LG6 - NC_024336.1Genomic Context describing neighboring genes Neighboring gene semaphorin 3E Neighboring gene protein piccolo-like Neighboring gene uncharacterized LOC103466002 Neighboring gene hepatocyte growth factor

Genomic regions, transcripts, and products

Genomic Sequence:
NC_024336.1 Chromosome LG6 Reference Guppy_female_1.0+MT Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
voltage-dependent calcium channel subunit alpha-2/delta-1
Names
calcium channel, voltage-dependent, alpha 2/delta subunit 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024336.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    13045404..13115866
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008411258.2XP_008409480.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1

    Conserved Domains (4) summary
    cd01463
    Location:235413
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam02743
    Location:442527
    Cache_1; Cache domain
    pfam08399
    Location:102219
    VWA_N; VWA N-terminal
    pfam08473
    Location:555638
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
  2. XM_008411259.2XP_008409481.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X3

    Conserved Domains (4) summary
    cd01463
    Location:235413
    vWA_VGCC_like; VWA Voltage gated Calcium channel like: Voltage-gated calcium channels are a complex of five proteins: alpha 1, beta 1, gamma, alpha 2 and delta. The alpha 2 and delta subunits result from proteolytic processing of a single gene product and carries at ...
    pfam02743
    Location:442528
    Cache_1; Cache domain
    pfam08399
    Location:102219
    VWA_N; VWA N-terminal
    pfam08473
    Location:540623
    VGCC_alpha2; Neuronal voltage-dependent calcium channel alpha 2acd
  3. XM_017305430.1XP_017160919.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X2

    Related
    ENSPREP00000020936.1, ENSPRET00000021159.1
  4. XM_017305431.1XP_017160920.1  voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X4

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