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thsd7b thrombospondin type 1 domain containing 7B [ Poecilia reticulata (guppy) ]

Gene ID: 103460796, updated on 14-Oct-2018

Summary

Gene symbol
thsd7b
Gene description
thrombospondin type 1 domain containing 7B
See related
Ensembl:ENSPREG00000014519
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs

Genomic context

See thsd7b in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
32
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG2 NC_024332.1 (37438983..37638692)

Linkage Group LG2 - NC_024332.1Genomic Context describing neighboring genes Neighboring gene aspartyl-tRNA synthetase Neighboring gene C-X-C motif chemokine receptor 4 Neighboring gene histamine N-methyltransferase-like Neighboring gene histamine N-methyltransferase-like

Genomic regions, transcripts, and products

Genomic Sequence:
NC_024332.1 Chromosome LG2 Reference Guppy_female_1.0+MT Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
thrombospondin type-1 domain-containing protein 7B
Names
thrombospondin, type I, domain containing 7B

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024332.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    37438983..37638692
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008403104.2XP_008401326.1  thrombospondin type-1 domain-containing protein 7B isoform X1

    See identical proteins and their annotated locations for XP_008401326.1

    Conserved Domains (1) summary
    smart00209
    Location:12851335
    TSP1; Thrombospondin type 1 repeats
  2. XM_008403129.2XP_008401351.1  thrombospondin type-1 domain-containing protein 7B isoform X2

    Conserved Domains (1) summary
    smart00209
    Location:12841334
    TSP1; Thrombospondin type 1 repeats
  3. XM_008403136.2XP_008401358.1  thrombospondin type-1 domain-containing protein 7B isoform X3

    Related
    ENSPREP00000021472.1, ENSPRET00000021697.1
    Conserved Domains (1) summary
    smart00209
    Location:12831333
    TSP1; Thrombospondin type 1 repeats
  4. XM_017303716.1XP_017159205.1  thrombospondin type-1 domain-containing protein 7B isoform X1

    Conserved Domains (1) summary
    smart00209
    Location:12851335
    TSP1; Thrombospondin type 1 repeats
  5. XM_008403111.1XP_008401333.1  thrombospondin type-1 domain-containing protein 7B isoform X1

    See identical proteins and their annotated locations for XP_008401333.1

    Conserved Domains (1) summary
    smart00209
    Location:12851335
    TSP1; Thrombospondin type 1 repeats
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