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snx16 sorting nexin 16 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103369043, updated on 15-Oct-2018

Summary

Gene symbol
snx16
Gene description
sorting nexin 16
See related
Ensembl:ENSSPAG00000008113
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs

Genomic context

See snx16 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578962.1 (190839..206165, complement)

NW_007578962.1Genomic Context describing neighboring genes Neighboring gene regulator of microtubule dynamics 1 Neighboring gene WW domain containing E3 ubiquitin protein ligase 1 Neighboring gene leukocyte elastase inhibitor-like Neighboring gene leukocyte elastase inhibitor-like

Genomic regions, transcripts, and products

Genomic Sequence:
NW_007578962 unplaced scaffold reference Stegastes_partitus-1.0.2

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578962.1 Reference Stegastes_partitus-1.0.2

    Range
    190839..206165 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008297640.1XP_008295862.1  sorting nexin-16 isoform X4

    Conserved Domains (1) summary
    cd07276
    Location:69178
    PX_SNX16; The phosphoinositide binding Phox Homology domain of Sorting Nexin 16
  2. XM_008297635.1XP_008295857.1  sorting nexin-16 isoform X1

    Related
    ENSSPAP00000010709.1, ENSSPAT00000010890.1
    Conserved Domains (1) summary
    cd07276
    Location:116225
    PX_SNX16; The phosphoinositide binding Phox Homology domain of Sorting Nexin 16
  3. XM_008297638.1XP_008295860.1  sorting nexin-16 isoform X2

    See identical proteins and their annotated locations for XP_008295860.1

    Conserved Domains (1) summary
    cd07276
    Location:116225
    PX_SNX16; The phosphoinositide binding Phox Homology domain of Sorting Nexin 16
  4. XM_008297639.1XP_008295861.1  sorting nexin-16 isoform X3

    Conserved Domains (1) summary
    cd07276
    Location:116225
    PX_SNX16; The phosphoinositide binding Phox Homology domain of Sorting Nexin 16
  5. XM_008297636.1XP_008295858.1  sorting nexin-16 isoform X2

    See identical proteins and their annotated locations for XP_008295858.1

    Related
    ENSSPAP00000010683.1, ENSSPAT00000010864.1
    Conserved Domains (1) summary
    cd07276
    Location:116225
    PX_SNX16; The phosphoinositide binding Phox Homology domain of Sorting Nexin 16

RNA

  1. XR_520811.1 RNA Sequence

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