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thumpd2 THUMP domain containing 2 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103364903, updated on 12-Mar-2017

Summary

Gene symbol
thumpd2
Gene description
THUMP domain containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs

Genomic context

See thumpd2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578523.1 (105560..112311, complement)

NW_007578523.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase kinase 3 Neighboring gene mitogen-activated protein kinase kinase kinase kinase 3-like Neighboring gene uncharacterized LOC103364904 Neighboring gene solute carrier family 8 member A1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_007578523 unplaced scaffold reference Stegastes_partitus-1.0.2

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
THUMP domain-containing protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578523.1 Reference Stegastes_partitus-1.0.2

    Range
    105560..112311 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008292193.1XP_008290415.1  THUMP domain-containing protein 2

    Conserved Domains (3) summary
    smart00981
    Location:304362
    THUMP; The THUMP domain is named after after thiouridine synthases, methylases and PSUSs
    cl12076
    Location:1370
    THUMP; THUMP domain, predicted to bind RNA
    cl17173
    Location:370511
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
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