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epb41l3 erythrocyte membrane protein band 4.1 like 3 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103353944, updated on 12-Mar-2017

Summary

Gene symbol
epb41l3
Gene description
erythrocyte membrane protein band 4.1 like 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs

Genomic context

See epb41l3 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007577821.1 (76832..136844, complement)

NW_007577821.1Genomic Context describing neighboring genes Neighboring gene APC down-regulated 1 Neighboring gene zinc finger and BTB domain-containing protein 14-like Neighboring gene transmembrane protein 200C-like Neighboring gene protein tyrosine phosphatase, receptor type M

Genomic regions, transcripts, and products

Genomic Sequence:
NW_007577821 unplaced scaffold reference Stegastes_partitus-1.0.2

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007577821.1 Reference Stegastes_partitus-1.0.2

    Range
    76832..136844 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008277144.1XP_008275366.1  band 4.1-like protein 3 isoform X2

    Conserved Domains (7) summary
    smart00295
    Location:3192
    B41; Band 4.1 homologues
    cd13184
    Location:187280
    FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
    pfam00373
    Location:85192
    FERM_M; FERM central domain
    pfam04382
    Location:423468
    SAB; SAB domain
    pfam05902
    Location:555660
    4_1_CTD; 4.1 protein C-terminal domain (CTD)
    pfam08736
    Location:289329
    FA; FERM adjacent (FA)
    pfam09379
    Location:567
    FERM_N; FERM N-terminal domain
  2. XM_008277143.1XP_008275365.1  band 4.1-like protein 3 isoform X1

    See identical proteins and their annotated locations for XP_008275365.1

    Conserved Domains (7) summary
    smart00295
    Location:95284
    B41; Band 4.1 homologues
    cd13184
    Location:279372
    FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
    pfam00373
    Location:177284
    FERM_M; FERM central domain
    pfam04382
    Location:515560
    SAB; SAB domain
    pfam05902
    Location:647752
    4_1_CTD; 4.1 protein C-terminal domain (CTD)
    pfam08736
    Location:381421
    FA; FERM adjacent (FA)
    pfam09379
    Location:97159
    FERM_N; FERM N-terminal domain
  3. XM_008277145.1XP_008275367.1  band 4.1-like protein 3 isoform X3

    Conserved Domains (6) summary
    smart00295
    Location:95284
    B41; Band 4.1 homologues
    cd13184
    Location:279372
    FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
    pfam00373
    Location:177284
    FERM_M; FERM central domain
    pfam05902
    Location:10311136
    4_1_CTD; 4.1 protein C-terminal domain (CTD)
    pfam08736
    Location:381421
    FA; FERM adjacent (FA)
    pfam09379
    Location:97159
    FERM_N; FERM N-terminal domain
  4. XM_008277142.1XP_008275364.1  band 4.1-like protein 3 isoform X1

    See identical proteins and their annotated locations for XP_008275364.1

    Conserved Domains (7) summary
    smart00295
    Location:95284
    B41; Band 4.1 homologues
    cd13184
    Location:279372
    FERM_C_4_1_family; FERM domain C-lobe of Protein 4.1 family
    pfam00373
    Location:177284
    FERM_M; FERM central domain
    pfam04382
    Location:515560
    SAB; SAB domain
    pfam05902
    Location:647752
    4_1_CTD; 4.1 protein C-terminal domain (CTD)
    pfam08736
    Location:381421
    FA; FERM adjacent (FA)
    pfam09379
    Location:97159
    FERM_N; FERM N-terminal domain
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