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HMGA2 high mobility group AT-hook 2 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 103348319, updated on 2-Dec-2024

Summary

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Gene symbol
HMGA2
Gene description
high mobility group AT-hook 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See HMGA2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_11 current mOryCun1.1 (GCF_964237555.1) 11 NC_091442.1 (68075961..68210115)
RS_2023_02 previous assembly UM_NZW_1.0 (GCF_009806435.1) 4 NC_067377.1 (52276651..52407628)

Chromosome 11 - NC_091442.1Genomic Context describing neighboring genes Neighboring gene LEM domain containing 3 Neighboring gene methionine sulfoxide reductase B3 Neighboring gene uncharacterized LOC138844382 Neighboring gene uncharacterized LOC138844383 Neighboring gene U2 spliceosomal RNA Neighboring gene cyclin-dependent kinase 2-interacting protein pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high mobility group protein HMGI-C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_964237555.1-RS_2024_11

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOryCun1.1

Genomic

  1. NC_091442.1 Reference mOryCun1.1

    Range
    68075961..68210115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017341960.3 → XP_017197449.1  high mobility group protein HMGI-C isoform X1

  2. XM_051845646.2 → XP_051701606.1  high mobility group protein HMGI-C isoform X2

RNA

  1. XR_011380142.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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