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SNRNP40 small nuclear ribonucleoprotein U5 subunit 40 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103225228, updated on 3-Apr-2017

Summary

Gene symbol
SNRNP40
Gene description
small nuclear ribonucleoprotein U5 subunit 40
See related
Ensembl:ENSCSAG00000001031
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus (gb-synonym: Cercopithecus sabaeus)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs

Genomic context

See SNRNP40 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Chlorocebus_sabeus 1.1 (GCF_000409795.2) 20 NC_023661.1 (101540827..101580298)

Chromosome 20 - NC_023661.1Genomic Context describing neighboring genes Neighboring gene fatty acid binding protein 3 Neighboring gene zinc finger CCHC-type containing 17 Neighboring gene transcription initiation factor IIA subunit 2-like Neighboring gene sodium/potassium transporting ATPase interacting 1 Neighboring gene selenoprotein W

Genomic regions, transcripts, and products

Genomic Sequence:
NC_023661.1 chromosome 20 reference Chlorocebus_sabeus 1.1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Pathways from BioSystems

General protein information

Preferred Names
U5 small nuclear ribonucleoprotein 40 kDa protein

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Chlorocebus_sabeus 1.1 Primary Assembly

Genomic

  1. NC_023661.1 Reference Chlorocebus_sabeus 1.1 Primary Assembly

    Range
    101540827..101580298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007979667.1XP_007977858.1  U5 small nuclear ribonucleoprotein 40 kDa protein

    Related
    ENSCSAP00000016981.1, ENSCSAT00000017502.1
    Conserved Domains (3) summary
    COG2319
    Location:104397
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:106395
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:114151
    7WD40; WD40 repeat [structural motif]
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