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LOC103177978 acylphosphatase-2 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103177978, updated on 7-Dec-2023

Summary

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Gene symbol
LOC103177978
Gene description
acylphosphatase-2
See related
Ensembl:ENSCMIG00000003936
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Also known as
acyp2
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Genomic context

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See LOC103177978 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704744.1 (83900505..83955335, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890076.1 (5868595..5922923, complement)

NW_024704744.1Genomic Context describing neighboring genes Neighboring gene spectrin, beta, non-erythrocytic 1 Neighboring gene uncharacterized protein C2orf73 Neighboring gene proteasome activator subunit 4b Neighboring gene toll-like receptor 6 Neighboring gene endoplasmic reticulum lectin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acylphosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acylphosphatase-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704744.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    83900505..83955335 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007892416.2 → XP_007890607.2  acylphosphatase-2

    Conserved Domains (1) summary
    COG1254
    Location:88 → 173
    AcyP; Acylphosphatase [Energy production and conversion]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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