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cdk5rap2 CDK5 regulatory subunit associated protein 2 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103151457, updated on 8-Apr-2017

Summary

Gene symbol
cdk5rap2
Gene description
CDK5 regulatory subunit associated protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs

Genomic context

See cdk5rap2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
55
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800221.1 (359425..395149)

NW_006800221.1Genomic Context describing neighboring genes Neighboring gene putative UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase LOC100288842 Neighboring gene collagen alpha-1(XXVII) chain B-like Neighboring gene nucleoporin 188 Neighboring gene phytanoyl-CoA dioxygenase domain containing 1 Neighboring gene dolichol kinase

Genomic regions, transcripts, and products

Genomic Sequence:
NW_006800221.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
CDK5 regulatory subunit-associated protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800221.1 Reference Poecilia_formosa-5.1.2

    Range
    359425..395149
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016681472.1XP_016536958.1  CDK5 regulatory subunit-associated protein 2 isoform X8

  2. XM_016681474.1XP_016536960.1  CDK5 regulatory subunit-associated protein 2 isoform X10

    Conserved Domains (5) summary
    cl14654
    Location:359537
    V_Alix_like; Protein-interacting V-domain of mammalian Alix and related domains
    COG0419
    Location:6091233
    SbcC; DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair]
    pfam07989
    Location:53121
    Cnn_1N; Centrosomin N-terminal motif 1
    pfam10174
    Location:97875
    Cast; RIM-binding protein of the cytomatrix active zone
    cl19219
    Location:97178
    DUF342; Protein of unknown function (DUF342)
  3. XM_016681475.1XP_016536961.1  CDK5 regulatory subunit-associated protein 2 isoform X11

  4. XM_016681473.1XP_016536959.1  CDK5 regulatory subunit-associated protein 2 isoform X9

  5. XM_016681464.1XP_016536950.1  CDK5 regulatory subunit-associated protein 2 isoform X1

  6. XM_016681469.1XP_016536955.1  CDK5 regulatory subunit-associated protein 2 isoform X6

  7. XM_016681465.1XP_016536951.1  CDK5 regulatory subunit-associated protein 2 isoform X2

  8. XM_016681467.1XP_016536953.1  CDK5 regulatory subunit-associated protein 2 isoform X4

  9. XM_016681466.1XP_016536952.1  CDK5 regulatory subunit-associated protein 2 isoform X3

  10. XM_016681468.1XP_016536954.1  CDK5 regulatory subunit-associated protein 2 isoform X5

  11. XM_016681471.1XP_016536957.1  CDK5 regulatory subunit-associated protein 2 isoform X7

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