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ATF1 activating transcription factor 1 [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103118273, updated on 12-Jan-2019

Summary

Gene symbol
ATF1
Gene description
activating transcription factor 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs

Genomic context

See ATF1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
101 current EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006804308.1 (49755..120634, complement)

NW_006804308.1Genomic Context describing neighboring genes Neighboring gene transmembrane serine protease 12 Neighboring gene disco interacting protein 2 homolog B Neighboring gene La ribonucleoprotein domain family member 4

Genomic regions, transcripts, and products

Genomic Sequence:
NW_006804308.1 Unplaced Scaffold Reference EriEur2.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
cyclic AMP-dependent transcription factor ATF-1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Erinaceus europaeus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EriEur2.0 Primary Assembly

Genomic

  1. NW_006804308.1 Reference EriEur2.0 Primary Assembly

    Range
    49755..120634 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016190578.1XP_016046064.1  cyclic AMP-dependent transcription factor ATF-1 isoform X1

    UniProtKB/TrEMBL
    A0A1S3WIU8
    Conserved Domains (2) summary
    cd14690
    Location:214268
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
    pfam02173
    Location:4882
    pKID; pKID domain
  2. XM_016190579.1XP_016046065.1  cyclic AMP-dependent transcription factor ATF-1 isoform X2

    UniProtKB/TrEMBL
    A0A1S3WIA0
    Conserved Domains (1) summary
    cd14690
    Location:133187
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
  3. XM_016190580.1XP_016046066.1  cyclic AMP-dependent transcription factor ATF-1 isoform X3

    UniProtKB/TrEMBL
    A0A1S3WI57
    Conserved Domains (1) summary
    cd14690
    Location:72126
    bZIP_CREB1; Basic leucine zipper (bZIP) domain of Cyclic AMP-responsive element-binding protein 1 (CREB1) and similar proteins: a DNA-binding and dimerization domain
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