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B4GALNT3 beta-1,4-N-acetyl-galactosaminyltransferase 3 [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103116385, updated on 11-Mar-2024

Summary

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Gene symbol
B4GALNT3
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
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Genomic context

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See B4GALNT3 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) 4 NC_080165.1 (105199704..105305347)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006804216.1 (104266..208675, complement)

Chromosome 4 - NC_080165.1Genomic Context describing neighboring genes Neighboring gene lysine demethylase 5A Neighboring gene coiled-coil domain containing 77 Neighboring gene ninjurin 2 Neighboring gene pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-N-acetylgalactosaminyltransferase 3
Names
beta-1,4-N-acetyl-galactosaminyl transferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080165.1 Reference mEriEur2.1

    Range
    105199704..105305347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060190325.1 → XP_060046308.1  beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X1

  2. XM_007526261.3 → XP_007526323.1  beta-1,4-N-acetylgalactosaminyltransferase 3 isoform X2

    UniProtKB/TrEMBL
    A0A1S2ZY04
    Conserved Domains (2) summary
    pfam07691
    Location:144 → 278
    PA14; PA14 domain
    cl11394
    Location:716 → 912
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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