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SNHG22 small nucleolar RNA host gene 22 [ Homo sapiens (human) ]

Gene ID: 103091864, updated on 9-Jan-2022

Summary

Official Symbol
SNHG22provided by HGNC
Official Full Name
small nucleolar RNA host gene 22provided by HGNC
Primary source
HGNC:HGNC:50285
See related
Ensembl:ENSG00000267322
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SCARNA17; SCARNA17HG
Expression
Broad expression in duodenum (RPKM 5.0), small intestine (RPKM 3.2) and 17 other tissues See more
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Genomic context

See SNHG22 in Genome Data Viewer
Location:
18q21.1
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 18 NC_000018.10 (49814023..49851059)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (47340393..47377429)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984031 Neighboring gene acetyl-CoA acyltransferase 2 Neighboring gene small Cajal body-specific RNA 17 Neighboring gene myosin VB Neighboring gene Sharpr-MPRA regulatory region 7262 Neighboring gene RNA, 5S ribosomal pseudogene 457

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Other Names

  • small nucleolar RNA host gene 22 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_117096.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC092705, AK123464
    Related
    ENST00000589499.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p13 Primary Assembly

    Range
    49814023..49851059
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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