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pla2g10 phospholipase A2 group X [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103040974, updated on 18-Sep-2024

Summary

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Gene symbol
pla2g10
Gene description
phospholipase A2 group X
See related
EnsemblRapid:ENSAMXG00025006635
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Astyanax
Also known as
zgc:92162
Orthologs
zebrafish all
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Genomic context

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See pla2g10 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
103 current AstMex3_surface (GCF_023375975.1) 3 NC_064410.1 (58085893..58101065, complement)
102 previous assembly Astyanax_mexicanus-2.0 (GCF_000372685.2) 23 NC_035919.1 (36929593..36945206, complement)

Chromosome 3 - NC_064410.1Genomic Context describing neighboring genes Neighboring gene interleukin-4 receptor subunit alpha Neighboring gene uncharacterized LOC111195542 Neighboring gene transfer RNA threonine (anticodon CGU) Neighboring gene zinc finger CCCH-type containing 7A Neighboring gene stannin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonate secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
group 10 secretory phospholipase A2
Names
PLA2c domain-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AstMex3_surface

Genomic

  1. NC_064410.1 Reference AstMex3_surface

    Range
    58085893..58101065 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007232069.4 → XP_007232131.1  group 10 secretory phospholipase A2

    UniProtKB/TrEMBL
    A0A3B1KCN6, A0A8B9KJ26, A0A8T2M9R5
    Related
    ENSAMXP00025008802.1, ENSAMXT00025012377.1
    Conserved Domains (1) summary
    cd00125
    Location:29 → 143
    PLA2c; PLA2c: Phospholipase A2, a family of secretory and cytosolic enzymes; the latter are either Ca dependent or Ca independent. PLA2 cleaves the sn-2 position of the glycerol backbone of phospholipids (PC or phosphatidylethanolamine), usually in a ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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