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atoh8 atonal bHLH transcription factor 8 [ Astyanax mexicanus (Mexican tetra) ]

Gene ID: 103039142, updated on 13-Oct-2018

Summary

Gene symbol
atoh8
Gene description
atonal bHLH transcription factor 8
See related
Ensembl:ENSAMXG00000037375
Gene type
protein coding
RefSeq status
MODEL
Organism
Astyanax mexicanus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Characiformes; Characoidei; Characidae; Characidae incertae sedis; Astyanax clade; Astyanax
Orthologs

Genomic context

See atoh8 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Astyanax_mexicanus-2.0 (GCF_000372685.2) 24 NC_035920.1 (13751413..13764223, complement)
101 previous assembly Astyanax_mexicanus-1.0.2 (GCF_000372685.1) Unplaced Scaffold NW_006739107.1 (393313..397383)

Chromosome 24 - NC_035920.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111195729 Neighboring gene transmembrane protein 129 Neighboring gene trypsin inhibitor ClTI-1-like Neighboring gene serine protease inhibitor Kazal-type 1-like

Genomic regions, transcripts, and products

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Astyanax mexicanus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Astyanax_mexicanus-2.0

Genomic

  1. NC_035920.1 Reference Astyanax_mexicanus-2.0

    Range
    13751413..13764223 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022683621.1XP_022539342.1  protein atonal homolog 8

    Related
    ENSAMXP00000054378.1, ENSAMXT00000052339.1
    Conserved Domains (1) summary
    pfam00010
    Location:173224
    HLH; Helix-loop-helix DNA-binding domain
  2. XM_022683622.1XP_022539343.1  protein atonal homolog 8

    Related
    ENSAMXP00000027719.1, ENSAMXT00000042212.1
    Conserved Domains (1) summary
    pfam00010
    Location:173224
    HLH; Helix-loop-helix DNA-binding domain
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