Format

Send to:

Choose Destination

GALNT17 polypeptide N-acetylgalactosaminyltransferase 17 [ Balaenoptera acutorostrata scammoni ]

Gene ID: 103011866, updated on 12-Oct-2019

Summary

Gene symbol
GALNT17
Gene description
polypeptide N-acetylgalactosaminyltransferase 17
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata scammoni (sub-species: scammoni)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Also known as
WBSCR17
Orthologs

Genomic context

See GALNT17 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 latest, but not current BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006728570.1 (7066350..7339182, complement)

NW_006728570.1Genomic Context describing neighboring genes Neighboring gene S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene calneuron 1 Neighboring gene transfer RNA arginine (anticodon CCU) Neighboring gene activator of transcription and developmental regulator AUTS2

Genomic regions, transcripts, and products

Genomic Sequence:
NW_006728570 Unplaced Scaffold Reference BalAcu1.0 Primary Assembly

General protein information

Preferred Names
polypeptide N-acetylgalactosaminyltransferase 17
Names
Williams-Beuren syndrome chromosome region 17

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Balaenoptera acutorostrata scammoni Annotation Release 101

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BalAcu1.0 Primary Assembly

Genomic

  1. NW_006728570.1 Reference BalAcu1.0 Primary Assembly

    Range
    7066562..7339182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007187003.2XP_007187065.1  polypeptide N-acetylgalactosaminyltransferase 17

    Conserved Domains (4) summary
    cd02510
    Location:84383
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG1216
    Location:85388
    GT2; Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism]
    cd00161
    Location:396522
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:394520
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Support Center