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POLH DNA polymerase eta [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103005059, updated on 3-Dec-2024

Summary

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Gene symbol
POLH
Gene description
DNA polymerase eta
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
human mouse all
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Genomic context

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See POLH in Genome Data Viewer
Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 10 NC_080073.1 (75238387..75268499)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006732678.1 (292956..324403)

Chromosome 10 - NC_080073.1Genomic Context describing neighboring genes Neighboring gene RNA polymerase I and III subunit C Neighboring gene exportin 5 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene GTP binding protein 2 Neighboring gene MAD2L1 binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-directed DNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables damaged DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in error-prone translesion synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to radiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in replication fork IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in site of double-strand break IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA polymerase eta
Names
polymerase (DNA directed), eta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080073.1 Reference mBalAcu1.1

    Range
    75238387..75268499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007193786.2 → XP_007193848.1  DNA polymerase eta isoform X1

    See identical proteins and their annotated locations for XP_007193848.1

    UniProtKB/TrEMBL
    A0A384B2F7, A0A384B2J2
    Conserved Domains (2) summary
    cd01702
    Location:11 → 428
    PolY_Pol_eta; DNA Polymerase eta
    COG0389
    Location:7 → 354
    DinP; Nucleotidyltransferase/DNA polymerase involved in DNA repair [Replication, recombination and repair]

  2. XM_007193785.2 → XP_007193847.1  DNA polymerase eta isoform X1

    See identical proteins and their annotated locations for XP_007193847.1

    UniProtKB/TrEMBL
    A0A384B2F7, A0A384B2J2
    Conserved Domains (2) summary
    cd01702
    Location:11 → 428
    PolY_Pol_eta; DNA Polymerase eta
    COG0389
    Location:7 → 354
    DinP; Nucleotidyltransferase/DNA polymerase involved in DNA repair [Replication, recombination and repair]

  3. XM_007193784.2 → XP_007193846.2  DNA polymerase eta isoform X2

    UniProtKB/TrEMBL
    A0A384B2A8
Nucleotide Protein
Heading Accession and Version

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