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PAN2 poly(A) specific ribonuclease subunit PAN2 [ Balaenoptera acutorostrata (minke whale) ]

Gene ID: 103001925, updated on 6-Jun-2024

Summary

Gene symbol
PAN2
Gene description
poly(A) specific ribonuclease subunit PAN2
Gene type
protein coding
RefSeq status
MODEL
Organism
Balaenoptera acutorostrata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Mysticeti; Balaenopteridae; Balaenoptera
Orthologs
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Genomic context

See PAN2 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_06 current mBalAcu1.1 (GCF_949987535.1) 11 NC_080074.1 (60522538..60537169)
101 previous assembly BalAcu1.0 (GCF_000493695.1) Unplaced Scaffold NW_006726687.1 (9733796..9748521, complement)

Chromosome 11 - NC_080074.1Genomic Context describing neighboring genes Neighboring gene apolipoprotein F Neighboring gene signal transducer and activator of transcription 2 Neighboring gene interleukin 23 subunit alpha Neighboring gene citrate synthase, mitochondrial Neighboring gene coenzyme Q10A Neighboring gene ankyrin repeat domain 52 Neighboring gene solute carrier family 39 member 5

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables poly(A)-specific ribonuclease activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in mRNA processing IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in nuclear-transcribed mRNA poly(A) tail shortening IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
PubMed 
part_of PAN complex IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
PAN2-PAN3 deadenylation complex catalytic subunit PAN2
Names
PAN2 poly(A) specific ribonuclease subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_949987535.1-RS_2023_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mBalAcu1.1

Genomic

  1. NC_080074.1 Reference mBalAcu1.1

    Range
    60522538..60537169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057556353.1XP_057412336.1  PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1

    UniProtKB/TrEMBL
    A0A383ZX15
  2. XM_007179605.3XP_007179667.2  PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X3

    UniProtKB/TrEMBL
    A0A383ZX15
  3. XM_057556354.1XP_057412337.1  PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X2

    UniProtKB/TrEMBL
    A0A383ZX15
  4. XM_057556355.1XP_057412338.1  PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X4

    UniProtKB/TrEMBL
    A0A383ZX15
  5. XM_057556356.1XP_057412339.1  PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X5

    UniProtKB/TrEMBL
    A0A383ZX15
  6. XM_057556357.1XP_057412340.1  PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X6

    UniProtKB/TrEMBL
    A0A383ZX15