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SYP synaptophysin [ Physeter catodon (sperm whale) ]

Gene ID: 102992049, updated on 17-Mar-2018

Summary

Gene symbol
SYP
Gene description
synaptophysin
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs

Genomic context

See SYP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM283717v1 (GCF_002837175.1) Unplaced Scaffold NW_019873631.1 (1625023..1632955)
100 previous assembly Physeter_macrocephalus-2.0.2 (GCF_000472045.1) Unplaced Scaffold NW_006714437.1 (235007..246840, complement)

NW_019873631.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 22 Neighboring gene calcium voltage-gated channel subunit alpha1 F Neighboring gene prickle planar cell polarity protein 3 Neighboring gene proteolipid protein 2 Neighboring gene MAGI family member, X-linked

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Physeter catodon Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v1 Primary Assembly

Genomic

  1. NW_019873631.1 Reference ASM283717v1 Primary Assembly

    Range
    1625023..1632955
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024116909.1XP_023972677.1  synaptophysin

    Conserved Domains (1) summary
    pfam01284
    Location:22221
    MARVEL; Membrane-associating domain
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