Format

Send to:

Choose Destination

WSB1 WD repeat and SOCS box containing 1 [ Physeter catodon (sperm whale) ]

Gene ID: 102989729, updated on 17-Mar-2018

Summary

Gene symbol
WSB1
Gene description
WD repeat and SOCS box containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs

Genomic context

See WSB1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM283717v1 (GCF_002837175.1) Unplaced Scaffold NW_019873574.1 (17577596..17594704, complement)
100 previous assembly Physeter_macrocephalus-2.0.2 (GCF_000472045.1) Unplaced Scaffold NW_006713739.1 (120045..136447)

NW_019873574.1Genomic Context describing neighboring genes Neighboring gene galectin 9 Neighboring gene kinase suppressor of ras 1 Neighboring gene neurofibromin 1 Neighboring gene ecotropic viral integration site 2B Neighboring gene oligodendrocyte myelin glycoprotein

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
WD repeat and SOCS box-containing protein 1

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Physeter catodon Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v1 Primary Assembly

Genomic

  1. NW_019873574.1 Reference ASM283717v1 Primary Assembly

    Range
    17577596..17594704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007109208.2XP_007109270.1  WD repeat and SOCS box-containing protein 1 isoform X1

    Conserved Domains (4) summary
    COG2319
    Location:38382
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:135388
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cd03746
    Location:382421
    SOCS_WSB1_SWIP1; SOCS (suppressors of cytokine signaling) box of WSB1/SWiP1-like proteins. This subfamily contains WSB-1 (SOCS-box-containing WD-40 protein), part of an E3 ubiquitin ligase for the thyroid-hormone-activating type 2 iodothyronine deiodinase (D2) and SWiP-1 ...
    sd00039
    Location:174212
    7WD40; WD40 repeat [structural motif]
  2. XM_024127626.1XP_023983394.1  WD repeat and SOCS box-containing protein 1 isoform X2

    Conserved Domains (2) summary
    sd00039
    Location:3873
    7WD40; WD40 repeat [structural motif]
    cl25539
    Location:135231
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
Support Center