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SPSB2 splA/ryanodine receptor domain and SOCS box containing 2 [ Physeter catodon (sperm whale) ]

Gene ID: 102983995, updated on 17-Mar-2018

Summary

Gene symbol
SPSB2
Gene description
splA/ryanodine receptor domain and SOCS box containing 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Physeter catodon
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Cetacea; Odontoceti; Physeteridae; Physeter
Orthologs

Genomic context

See SPSB2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM283717v1 (GCF_002837175.1) Unplaced Scaffold NW_019873578.1 (6611678..6614086, complement)
100 previous assembly Physeter_macrocephalus-2.0.2 (GCF_000472045.1) Unplaced Scaffold NW_006713613.1 (130388..132590, complement)

NW_019873578.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 5 Neighboring gene triosephosphate isomerase 1 Neighboring gene leucine rich repeat containing 23 Neighboring gene enolase 2

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
SPRY domain-containing SOCS box protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Physeter catodon Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM283717v1 Primary Assembly

Genomic

  1. NW_019873578.1 Reference ASM283717v1 Primary Assembly

    Range
    6611678..6614086 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007108297.2XP_007108359.2  SPRY domain-containing SOCS box protein 2 isoform X2

    Conserved Domains (2) summary
    cd03719
    Location:224265
    SOCS_SSB2; SOCS (suppressors of cytokine signaling) box of SSB2 (SPRY domain-containing SOCS box proteins)-like proteins. SSB proteins contain a central SPRY domain and a C-terminal SOCS. SSB2 has been shown to bind to MET, the receptor protein-tyrosine kinase for ...
    cd12906
    Location:48219
    SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)
  2. XM_024129231.1XP_023984999.1  SPRY domain-containing SOCS box protein 2 isoform X1

    Conserved Domains (1) summary
    cd12906
    Location:48219
    SPRY_SOCS1-2-4; SPRY domain in the suppressor of cytokine signaling 1, 2, 4 families (SOCS1, SOCS2, SOCS4)
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