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Zbtb16 zinc finger and BTB domain containing 16 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102911925, updated on 28-Aug-2017

Summary

Gene symbol
Zbtb16
Gene description
zinc finger and BTB domain containing 16
See related
Ensembl:ENSPEMG00000008489
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs

Genomic context

See Zbtb16 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501163.1 (378462..562743)

NW_006501163.1Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine receptor 3B Neighboring gene 5-hydroxytryptamine receptor 3A Neighboring gene nicotinamide N-methyltransferase Neighboring gene chromosome unknown open reading frame, human C11orf71

Genomic regions, transcripts, and products

Genomic Sequence:
NW_006501163.1 Unplaced Scaffold Reference Pman_1.0

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
zinc finger and BTB domain-containing protein 16

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Pman_1.0

Genomic

  1. NW_006501163.1 Reference Pman_1.0

    Range
    378462..562743
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006979752.2XP_006979814.1  zinc finger and BTB domain-containing protein 16

    See identical proteins and their annotated locations for XP_006979814.1

    Related
    ENSPEMP00000006200.1, ENSPEMT00000010311.1
    Conserved Domains (6) summary
    smart00225
    Location:35106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:448622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:518540
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25106
    BTB; BTB/POZ domain
    pfam13465
    Location:561584
    zf-H2C2_2; Zinc-finger double domain
  2. XM_006979753.2XP_006979815.1  zinc finger and BTB domain-containing protein 16

    See identical proteins and their annotated locations for XP_006979815.1

    Conserved Domains (6) summary
    smart00225
    Location:35106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:448622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:518540
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25106
    BTB; BTB/POZ domain
    pfam13465
    Location:561584
    zf-H2C2_2; Zinc-finger double domain
  3. XM_015998390.1XP_015853876.1  zinc finger and BTB domain-containing protein 16

    Conserved Domains (6) summary
    smart00225
    Location:35106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:448622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:518540
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25106
    BTB; BTB/POZ domain
    pfam13465
    Location:561584
    zf-H2C2_2; Zinc-finger double domain
  4. XM_015998389.1XP_015853875.1  zinc finger and BTB domain-containing protein 16

    Conserved Domains (6) summary
    smart00225
    Location:35106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:448622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:518540
    zf-C2H2; Zinc finger, C2H2 type
    pfam00651
    Location:25106
    BTB; BTB/POZ domain
    pfam13465
    Location:561584
    zf-H2C2_2; Zinc-finger double domain
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