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LRRFIP1 LRR binding FLII interacting protein 1 [ Pteropus alecto (black flying fox) ]

Gene ID: 102894563, updated on 19-May-2018

Summary

Gene symbol
LRRFIP1
Gene description
LRR binding FLII interacting protein 1
Locus tag
PAL_GLEAN10006419
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Megachiroptera; Pteropodidae; Pteropodinae; Pteropus
Orthologs

Genomic context

See LRRFIP1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006434828.1 (2508312..2582315)

NW_006434828.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112478328 Neighboring gene uncharacterized LOC112478325 Neighboring gene 5S ribosomal RNA Neighboring gene RNA binding motif protein 44 Neighboring gene receptor activity modifying protein 1

Genomic regions, transcripts, and products

Genomic Sequence:
NW_006434828 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General protein information

Preferred Names
leucine-rich repeat flightless-interacting protein 1
Names
Leucine-rich repeat flightless-interacting protein 1
Leucine-rich repeat flightless-interacting protein 2

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006434828.1 Reference ASM32557v1 Primary Assembly

    Range
    2508312..2582315
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025045443.1XP_024901211.1  leucine-rich repeat flightless-interacting protein 1 isoform X11

    Conserved Domains (2) summary
    pfam09738
    Location:39459
    LRRFIP; LRRFIP family
    cl25732
    Location:264532
    SMC_N; RecF/RecN/SMC N terminal domain
  2. XM_006909896.2XP_006909958.1  leucine-rich repeat flightless-interacting protein 1 isoform X12

    Conserved Domains (1) summary
    pfam09738
    Location:39318
    DUF2051; Double stranded RNA binding protein (DUF2051)
  3. XM_025045438.1XP_024901206.1  leucine-rich repeat flightless-interacting protein 1 isoform X1

    Conserved Domains (1) summary
    pfam09738
    Location:39357
    LRRFIP; LRRFIP family
  4. XM_015587846.2XP_015443332.1  leucine-rich repeat flightless-interacting protein 1 isoform X6

    Conserved Domains (1) summary
    pfam09738
    Location:39319
    DUF2051; Double stranded RNA binding protein (DUF2051)
  5. XM_025045440.1XP_024901208.1  leucine-rich repeat flightless-interacting protein 1 isoform X3

    Conserved Domains (1) summary
    pfam09738
    Location:39333
    LRRFIP; LRRFIP family
  6. XM_015587847.2XP_015443333.1  leucine-rich repeat flightless-interacting protein 1 isoform X8

    Conserved Domains (1) summary
    pfam09738
    Location:39295
    DUF2051; Double stranded RNA binding protein (DUF2051)
  7. XM_025045439.1XP_024901207.1  leucine-rich repeat flightless-interacting protein 1 isoform X2

    Conserved Domains (1) summary
    pfam09738
    Location:39335
    LRRFIP; LRRFIP family
  8. XM_006909898.3XP_006909960.1  leucine-rich repeat flightless-interacting protein 1 isoform X7

    Conserved Domains (1) summary
    pfam09738
    Location:39297
    DUF2051; Double stranded RNA binding protein (DUF2051)
  9. XM_006909897.3XP_006909959.1  leucine-rich repeat flightless-interacting protein 1 isoform X9

    Conserved Domains (1) summary
    pfam09738
    Location:39273
    DUF2051; Double stranded RNA binding protein (DUF2051)
  10. XM_025045442.1XP_024901210.1  leucine-rich repeat flightless-interacting protein 1 isoform X5

    Conserved Domains (1) summary
    pfam09738
    Location:39303
    LRRFIP; LRRFIP family
  11. XM_006909894.3XP_006909956.1  leucine-rich repeat flightless-interacting protein 1 isoform X10

    Conserved Domains (1) summary
    pfam09738
    Location:39241
    DUF2051; Double stranded RNA binding protein (DUF2051)
  12. XM_025045441.1XP_024901209.1  leucine-rich repeat flightless-interacting protein 1 isoform X4

    Conserved Domains (2) summary
    pfam09738
    Location:54305
    LRRFIP; LRRFIP family
    cl25732
    Location:180492
    SMC_N; RecF/RecN/SMC N terminal domain
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