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LINC02327 long intergenic non-protein coding RNA 2327 [ Homo sapiens (human) ]

Gene ID: 102724917, updated on 10-Oct-2023

Summary

Official Symbol
LINC02327provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2327provided by HGNC
Primary source
HGNC:HGNC:53247
See related
Ensembl:ENSG00000258038 AllianceGenome:HGNC:53247
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC02327 in Genome Data Viewer
Location:
14q12
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (28830235..28968396)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (23028136..23166300)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1551 Neighboring gene long intergenic non-protein coding RNA 2282 Neighboring gene long intergenic non-protein coding RNA 2281 Neighboring gene Vac14, PIKFYVE complex component pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chr14:29345421-29345922 Neighboring gene uncharacterized LOC107984685 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:29445875-29447074 Neighboring gene long intergenic non-protein coding RNA 2326 Neighboring gene RNA, U6 small nuclear 864, pseudogene Neighboring gene Sharpr-MPRA regulatory region 1682 Neighboring gene uncharacterized LOC102724934 Neighboring gene VISTA enhancer hs566 Neighboring gene VISTA enhancer hs1539 Neighboring gene VISTA enhancer hs1168 Neighboring gene VISTA enhancers hs342 and hs1523

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_184190.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049777, AL122126, AL138974
  2. NR_184191.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049777, AL122126, AL138974
    Related
    ENST00000656401.1
  3. NR_184192.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049777, AL122126
  4. NR_184193.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049777, AL122126
  5. NR_184194.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049777, AL122126, AL138974
    Related
    ENST00000551588.6
  6. NR_184195.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049777, AL122126, AL138974
    Related
    ENST00000657083.1
  7. NR_184196.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049777, AL122126
  8. NR_184197.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049777, AL122126
  9. NR_184198.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049777, AL122126
    Related
    ENST00000667065.1
  10. NR_184199.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049777, AL122126, AL138974
  11. NR_184200.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL049777, AL122126
    Related
    ENST00000660501.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    28830235..28968396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    23028136..23166300
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)