U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LINC01899 long intergenic non-protein coding RNA 1899 [ Homo sapiens (human) ]

Gene ID: 102724913, updated on 17-Jun-2024

Summary

Official Symbol
LINC01899provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1899provided by HGNC
Primary source
HGNC:HGNC:52718
See related
Ensembl:ENSG00000265352 AllianceGenome:HGNC:52718
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LINC01899 in Genome Data Viewer
Location:
18q22.3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (71732615..71782226, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (71954210..72003812, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (69399851..69449462, complement)

Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985179 Neighboring gene long intergenic non-protein coding RNA 1541 Neighboring gene uncharacterized LOC105372186 Neighboring gene uncharacterized LOC105376873 Neighboring gene uncharacterized LOC102725148 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr18:69673999-69675198 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr18:69758554-69759075 Neighboring gene uncharacterized LOC105372189

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_126324.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC027458
    Related
    ENST00000583756.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

    Range
    71732615..71782226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060942.1 Alternate T2T-CHM13v2.0

    Range
    71954210..72003812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)